PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Ote100023940131
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Lamiales; Lamiaceae; Nepetoideae; Ocimeae; Ocimum
Family bHLH
Protein Properties Length: 405aa    MW: 44356.1 Da    PI: 6.7821
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Ote100023940131genomeOteDB-
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.44.7e-12339384655
                                   HHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                           HLH   6 nerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                                   +++Er RR +i +++ +L+el+P+      k  + +++L +Av+YIk+Lq
  Ote100023940131|100023940131 339 SIAERVRRTKISERMRKLQELVPNM----EKQTNTSDMLDLAVDYIKELQ 384
                                   689*********************6....4679****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.875333383IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.24E-15336397IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000834.66E-12337388No hitNo description
Gene3DG3DSA:4.10.280.101.4E-14338398IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003531.6E-12339389IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.6E-9339384IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 405 aa     Download sequence    Send to blast
MMNSQQQFDQ NTQMGSGLTR YRSAPSSYFA SLLNSPGGDG GFGADDFAQL FNPRASSPET  60
QMIFSRFMNS TGAVQEPCPS NMAPPSLTPR KSKTEEYXXX XXXXXXDYSS ASQMMYANQN  120
TEAATEPAAV DRIFASFNSS CAAAQPKMER PAAASSSLIR HSSSPAGLFA NINIENVSDY  180
KTMRGYGGGH SIDAEASFSS TRRVMGRHTS SGMMDTISEM GSKGMGENAA DDAQFDGDNG  240
SVIDDYITGL PVNSWDDSAL MSDPYLKGVA PDNENKRFFN SNASDDQKNE AANRPKTLLS  300
HHLSLPKSSA ELSAMEKLLQ DSVPCKIRAK RGCATHPRSI AERVRRTKIS ERMRKLQELV  360
PNMEKQTNTS DMLDLAVDYI KELQRQLKTL TDNQAKCNCS AKQRS
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011080320.11e-153PREDICTED: transcription factor bHLH130-like
TrEMBLA0A0H3YC401e-150A0A0H3YC40_SALMI; Basic helix-loop-helix transcription factor
STRINGSolyc12g100140.1.11e-104(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA46052239